BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005F09SP1|AL425409
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1880 0.0
>3x_Contig1800
Length = 38778
Score = 1880 bits (945), Expect = 0.0
Identities = 967/975 (99%), Gaps = 2/975 (0%)
Strand = Plus / Plus
Query: 1 gatctatataggttgtcatctagaaaccagactgtaaatattcatctggacttgtgaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30033 gatctatataggttgtcatctagaaaccagactgtaaatattcatctggacttgtgaaaa 30092
Query: 61 aaaagggctggcatcagtagaccgtgaatwatttacaaagatacgacatttaatttctgg 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 30093 aaaagggctggcatcagtagaccgtgaattatttacaaagatacgacatttaatttctgg 30152
Query: 121 ccgatctgtgacagagagagtatttaatgaatcattctttatttgcagccaaaatttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30153 ccgatctgtgacagagagagtatttaatgaatcattctttatttgcagccaaaatttgat 30212
Query: 181 ttacagaatcagtgacactttgttcaaatggaacaaattcgaacccaagtaatttcctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30213 ttacagaatcagtgacactttgttcaaatggaacaaattcgaacccaagtaatttcctag 30272
Query: 241 tcttggagttatcatacttactagtggttgctacgatgtctttaccggcacctggatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30273 tcttggagttatcatacttactagtggttgctacgatgtctttaccggcacctggatttc 30332
Query: 301 caacagagatctttcccttcagctcaggatagttttcattgatgaaatcagctacatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30333 caacagagatctttcccttcagctcaggatagttttcattgatgaaatcagctacatctt 30392
Query: 361 gtagtgcaaaccttttgttcattaataccaacctttgacctgcaaatttagggtcctcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30393 gtagtgcaaaccttttgttcattaataccaacctttgacctgcaaatttagggtcctcca 30452
Query: 421 atggtaaaamatgtgccttggcaacatctctgacgtcaatkaacgaaccggccaaatgtt 480
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 30453 atggtaaaacatgtgccttggcaacatctctgacgtcaatgaacgaaccggccaaatgtt 30512
Query: 481 ggtcaataacatctccaggcttgctgttcaagataccattgactagttcacctgaatagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30513 ggtcaataacatctccaggcttgctgttcaagataccattgactagttcacctgaatagc 30572
Query: 541 acaaggcaccttttgcgttttcatcaaatgcttgaggtccaagaacatatcctgggcata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30573 acaaggcaccttttgcgttttcatcaaatgcttgaggtccaagaacatatcctgggcata 30632
Query: 601 tggtggttagttggaatttgagctgatctctattttcctttataaactcccaagtagatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30633 tggtggttagttggaatttgagctgatctctattttcctttataaactcccaagtagatc 30692
Query: 661 tctcagcaaaggtcttagaaccgtagtatgcagagtggacatccttaatagcatcattcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30693 tctcagcaaaggtcttagaaccgtagtatgcagagtggacatccttaatagcatcattcc 30752
Query: 721 acgtatctgggtttcaagtctcttcagttagagtagtttcaggtttgaaaatacctgctg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30753 acgtatctgggtttcaagtctcttcagttagagtagtttcaggtttgaaaatacctgctg 30812
Query: 781 gattagccaacgcagatatagacgaa-kgtaaactactgtctcgacagaatccgcagaga 839
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 30813 gattagccaacgcagatatagacgaagtgtaaactactgtctcgacagaatccgcagaga 30872
Query: 840 actttttgatagattctaatacagacctggtaccattgatagctggcaaaagcatctcat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30873 actttttgatagattctaatacagacctggtaccattgatagctggcaaaagcatctcat 30932
Query: 900 tctcaaaatcagtcatattgtaacggactggag-agctgtgtgaatcacatgcttgakct 958
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 30933 tctcaaaatcagtcatattgtaacggactggagaagctgtgtgaatcacatgcttgatct 30992
Query: 959 gagttttgtactttt 973
|||| ||||||||||
Sbjct: 30993 gagtattgtactttt 31007
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6765
Number of Sequences: 1807
Number of extensions: 6765
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)